Once a computer has been compromised by a virus, it is usually unsafe to continue using the same computer without completely reinstalling the operating system. However, there are a number of recovery options that exist after a computer has a virus. These actions depend on severity of the type of virus.

removal
One possibility on Windows is a tool known as System Restore, which restores the registry and critical system files to a previous checkpoint. Often a virus will cause a system to hang, and a subsequent hard reboot will render a system restore point from the same day corrupt.

Restore points from previous days should work provided the virus is not designed to corrupt the restore files or also exists in previous restore points. Some viruses, however, disable system restore and other important tools such as Task Manager and Command Prompt. An example of a virus that does this is CiaDoor.

Administrators have the option to disable such tools from limited users for various reasons to reduce potential damage from and the spread of viruses. The virus modifies the registry to do the same, except, when the Administrator is controlling the computer, it blocks all users from accessing the tools.

When an infected tool activates it gives the message "Task Manager has been disabled by your administrator.", even if the user trying to open the program is the administrator.

Operating system reinstallation
Reinstalling the operating system is another approach to virus removal. It involves simply reformatting the OS partition and installing the OS from its original media, or imaging the partition with a clean backup image (Taken with Ghost or Acronis for example).

This method has the benefits of being simple to do, being faster than running multiple antivirus scans, and is guaranteed to remove any malware. Downsides include having to reinstall all other software, reconfiguring, restoring user preferences. User data can be backed up by booting off of a Live CD or putting the hard drive into another computer and booting from the other computer's operating system (though care must be taken not to transfer the virus to the new computer).